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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910678.1_cds_XP_016460688.1_54086
CDS Infomation

[gene=LOC107784132] [db_xref=GeneID:107784132] [protein=probable prolyl 4-hydroxylase 4] [protein_id=XP_016460688.1] [location=join(18336..18559,18972..19029,19132..19236,26041..26098,27020..27246)] [gbkey=CDS]
Sequence

ATGCCCTCTAACTCATGTGCTGAATGTTCAAGTGACAGTTCACGCGAATTGGATTCAAAG
TTGGATACTTACATTTTCCCGAGAAAATTCCACACTATGATTAACTTTTCGCAGATCGCC
AGTTTCTTCTTCTTCATCTTGATCGCCGCCGCGTTCGTCACTAAATCATCATGCTCCGCC
ATCATCAATCCCTCTAAAGTCAAGCAAATTTCATGGAAACCTAGAGCTTTTGTGTATGAA
GGTTTCCTTACGGATGAAGAATGCAATCATTTGGTATCTCTTGCGAAGAAGGAGTTGAAA
AGATCGGCTGTGGCAGATAATGAGTCTGGGGAAAGTAAGCTCAGTGAGGTTAGGACTAGT
TCCGGGATGTTCATTAGCAAAGCAAAGGATCCTATTGTTGCTGGGATAGAGGACAAGATA
GCGACTTGGGCTTTTCTACCAAAAGAGAATGGAGAAGACATACAAGTTCTAAGATACGAG
GAAGGGCAGAAATATGAGCCACACTATGATTACTTCTCCGACAAGGTTAATATTGTTCGT
GGTGGACACCGGTTAGCCACGGTACTCATGTATCTCAGTGATGTCGAGAAAGGAGGTGAA
ACTGTCTTCCCTGAAGCAGAGGTTAGTTCAAGTTTGTCCCTTTTTTGTACCTTTACACTG
ATAAAAGCGTGA

Peptide Sequence

PEP ID

XP_016460688.1
PEP Infomation

PREDICTED: probable prolyl 4-hydroxylase 4 [Nicotiana tabacum]
Sequence

MPSNSCAECSSDSSRELDSKLDTYIFPRKFHTMINFSQIASFFFFILIAAAFVTKSSCSA
IINPSKVKQISWKPRAFVYEGFLTDEECNHLVSLAKKELKRSAVADNESGESKLSEVRTS
SGMFISKAKDPIVAGIEDKIATWAFLPKENGEDIQVLRYEEGQKYEPHYDYFSDKVNIVR
GGHRLATVLMYLSDVEKGGETVFPEAEVSSSLSLFCTFTLIKA

Transcript Sequence

Gene sequence data has not been registered.